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Natural Environment Research Council Designated Data Centres

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  • The project aim was to develop process-based computer simulations of the dispersal of Homo erectus out of Africa. This involved developing realistic constraints on the patterns of vegetation and the effects of changes in global sea level. It was assumed that this migration out of Africa could be investigated through the paradigm of a single migration event, starting around 2 millions of years ago and arriving in Dmanisi around 1.8 millions of years ago. The data archived here consists of the vegetation patterns used in constructing the simulations and the patterns of climate variability used to constrain the variations in sea level and vegetation change. From these data it is possible to reproduce the simulation results. Simulation results are available from J.K. Hughes, A. Haywood, S.J. Mithen, B.W. Sellwood, P.J. Valdes (In Press) Investigating Early Hominin Dispersal Patterns : developing a framework for climate data integration. Journal Of Human Evolution.

  • To reconstruct the maternal demographic history of the populations of the Andaman and Nicobar archipelagos using genetic profiles obtained from colonial era skeletal material and hair collections. The project had two main technical arms: to obtain authentic DNA data from well-handled museum collections of human material, which were a priori presumed to be heavily contaminated; to use the data to fill in lacuna in the genetic landscape left by large-scale demographic decline caused by disease and social disruption associated with the modern era. The major aim of the interpretative phase of the project was to obtain realistic estimates for the date of settlement of these island groups based on genetics because of the absence of reliable archaeological evidence. The main aim of this research was to determine whether the Andaman islanders were part of a very early radiation from Africa or arrived to their archipelago much later. The Nicobars were included in the research to have a comparative data set from the same region from people with a different phenotype. The data set is comprised of mitochondrial DNA control region sequences and coding region Single Nucleotide Polymorphisms.

  • This research sought to explore the pattern of population movement (direction, rate, permanency) along a hypothesised route from Africa to Australasia during Oxygen Isotope Stage 4. Using GIS-based analyses and hypothetical models of population movement, potential routes out of East Africa were generated and examined. The goal of these analyses was to assess the viability of particular routes, and consider them in terms of ecological and geographical constraints. As a result, several routes through Africa, Arabia, South Asia, Southeast Asia, and Australasia were proposed and evaluated. These routes have been further examined with regards to archaeological site location, the timing of human presence in South Asia, and biological indicators of human diversity.

  • The spectacular botanical preservation and long occupation of Qasr Ibrim, Egypt make this site archaeobotanically matchless. 600 samples have been collected over 20 years covering a timespan of c. 1000 BC - AD 1800. The project has particularly focussed on the period AD 100-400 during which several new summer crops including sorghum, cotton, lablab and sesame first appear. These new crops are thought to be associated with the introduction of new irrigation technology, specifically a device known as the saqia, an ox-driven water wheel from which descends a conveyor belt to which pots are attached. It has never before been possible to examine this crucial change archaeologically and this project has allowed the investigation of when and how this great change happened. This has major implications for the history of agriculture in Africa and the Indian Ocean.

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    This dataset comprises measurements of microbial uptake activities of betaine and choline, particulate phase osmolytes, amplicon sequencing of marker genese involved in Nitrogenous-osmolyte catabolism, and single cell genome data. Water samples were collected from at the L4 station of the Western Channel Observatory between April 27, 2015 to April 24, 2017 using Niskin bottles attached to a rosette sampler deployed from the RV Plymouth Quest. Nitrogenous osmolytes (glycine betaine, choline and trimethylamine N-oxide are essential components for most organisms in the marine environment. They enable cells to exist in a salty environment, but also have several other proposed uses. The aim of the project is to understand the seasonal cycle of glycine betaine, trimethylamine N-oxide and choline at Station L4. The water samples were analysed for the microbial assimilation and dissimilation activities using 14C labelled betaine and choline, respectively. The data will be incorporated to the European Regional Seas Ecosystem Model (ERSEM) coupled with the hydrodynamic model General Ocean Turbulent Model (GOTM) to simulate the N-osmolyte cycling at the L4 station. The data were collected under the project Biogeochemical cycling of N-osmolytes in the surface ocean funded by NERC Discovery Science grants NE/M002233/1 (parent), NE/M003361/1 (child), NE/M002934/1 (child). The grants were led by Dr Yin Chen, Dr Ruth Airs, and Dr Wei Huang respectively.

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    The GEBCO_2020 Grid is a global continuous terrain model for ocean and land with a spatial resolution of 15 arc seconds. In regions outside of the Arctic Ocean area, the grid uses as a base Version 2 of the SRTM15_plus data set (Tozer, B. et al, 2019). This data set is a fusion of land topography with measured and estimated seafloor topography. Included on top of this base grid are gridded bathymetric data sets developed by the four Regional Centers of The Nippon Foundation-GEBCO Seabed 2030 Project. The GEBCO_2020 Grid represents all data within the 2020 compilation. The compilation of the GEBCO_2020 Grid was carried out at the Seabed 2030 Global Center, hosted at the National Oceanography Centre, UK, with the aim of producing a seamless global terrain model. Outside of Polar regions, the gridded bathymetric data sets supplied by the Regional Centers, as sparse grids, i.e. only grid cells that contain data were populated, were included on to the base grid without any blending. The data sets supplied in the form of complete grids (primarily areas north of 60N and south of 50S) were included using feather blending techniques from GlobalMapper software. The GEBCO_2020 Grid has been developed through the Nippon Foundation-GEBCO Seabed 2030 Project. This is a collaborative project between the Nippon Foundation of Japan and the General Bathymetric Chart of the Oceans (GEBCO). It aims to bring together all available bathymetric data to produce the definitive map of the world ocean floor by 2030 and make it available to all. Funded by the Nippon Foundation, the four Seabed 2030 Regional Centers include the Southern Ocean - hosted at the Alfred Wegener Institute, Germany; South and West Pacific Ocean - hosted at the National Institute of Water and Atmospheric Research, New Zealand; Atlantic and Indian Oceans - hosted at the Lamont Doherty Earth Observatory, Columbia University, USA; Arctic and North Pacific Oceans - hosted at Stockholm University, Sweden and the Center for Coastal and Ocean Mapping at the University of New Hampshire, USA.

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    The WireWall project developed a prototype wave overtopping field measurement system. The system was designed and trailed at Crosby Beach, Hall Road carpark, north of Liverpool during winter 2018/2019. The data collected include both wave-by-wave overtopping volumes and horizontal velocities. At the time of the project the coastal structure at this site comprised a stepped revetment and vertical sea wall with a recurve. The system was designed at the National Oceanography Centre, validated in HR Wallingford’s flume facility and deployed with Sefton Council. Five datasets are available from the project. These contain processed data from: 1) The numerical wave overtopping estimates for past events used to design the system and plan deployments; 2) The numerical wave overtopping estimates for the joint wave and water level conditions with a 1 in 1 year return period probability to a 1 in 200 year return period probability in Liverpool Bay; 3) The dock side tests; 4) The physical laboratory experiments; and, 5) The field trials during windy spring tides. For Crosby these data can be used to validate/calibrate numerical tools used for coastal scheme design and flood hazard forecasting. Beach profile data collected alongside the overtopping measurements have been archived with the Northwest Regional Coastal Monitoring Programme, https://www.channelcoast.org/northwest/. This project was delivered by the National Oceanography Centre in collaboration with HR Wallingford. Our project partners were Sefton Council, Balfour Beatty, Environment Agency, Channel Coastal Observatory and Marlan Maritime Technologies.

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    The Mediterranean-Alpine Experiment (MEDALPEX) data set comprises over 200,000 hourly sea level measurements. Data are included from 28 sites around the northern coast of the Mediterranean and one in the Atlantic at Cadiz. Measurements were collected from December 1981 and September 1982, with a special observing period (SOP) between 15 February and 30 April 1982. Twenty eight coastal sites were instrumented with conventional stilling wells, while one offshore site off Corsica used a bottom pressure recorder. The data are stored, together with benchmark information, as time series at each site with hourly values of sea surface elevation recorded to the nearest millimetre. The aim of the MEDALPEX Experiment was to study the role of atmospheric forcing on the dynamics of the Western Mediterranean. Data were supplied by laboratories in Belgium, France, Monaco, Italy, Spain, UK and former Yugoslavia. Responsibility for assembling, quality controlling and analyzing the sea level data collected during MEDALPEX was vested in the British Oceanographic Data Centre (BODC).

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    A set of historical tide gauge sea level records from Alicante (Spanish Mediterranean coast) have been recovered from logbooks stored at the Spanish National Geographical Institute (IGN). Sea level measurements have been digitised, quality-controlled and merged into two consistent sea level time series. Vertical references among instruments benchmarks have been derived from high precision vertical levelling surveys. Earlier observations are daily averages and more recent data are hourly values. The observations are from 7 different tide gauge records in Alicante outer harbour (Alicante I) and five tide gauge series in Alicante inner harbour (Alicante II). The sea level record in Alicante starts in 1870 with daily averaged values until the 1920s and hourly afterwards, and is still in operation, thus representing the longest tide gauge sea level time series in the Mediterranean Sea. The sea level at Alicante I has been measured by tide pole, floating gauge, mechanical recorder, digital recorder and since 2014 by radar gauge. The sea level at Alicante II has been measured by floating gauge, digital recorder and from 2014 onwards by radar gauge. This scarcity of long-term sea-level observations, as well as their uneven geographical distribution is a major challenge for climate studies that address, for example, the quantification of mean sea-level rise at centennial time scales, the accurate assessment of sea-level acceleration or the long-term changes in sea-level extremes that are vital for coastal risk assessments. This dataset represents an additional effort of sea-level data archaeology and aims at preserving the historical scientific heritage that has been up to now stored in old archives in non-electronic format. The research was partially funded by the Spanish Ministry of Science, Innovation and Universities. A further series was rescued from Santander under the same initiative.

  • The Ancient Biomolecules Initiative is a Natural Environment Research Council programme exploring the biomolecular record of past life which is entombed in archaeological and geological deposits. The findings have applications in archaeology, anthropology, forensic science, research into the past climates and oil exploration. This resource consists of a series of leaflets in PDF format which describe the key findings of the Ancient Biomolecules Initiative.